4 0 0 4  << NO. OF LOCI, RISK LOCUS, SEXLINKED (IF 1), PROGRAM
0 0.0 0.0 0  << MUT LOCUS, MUT RATE, HAPLOTYPE FREQUENCIES (IF 1)
1 2 3 4 << ORDER OF LOCI
1  2  << AFFECTATION LOCUS, NO. OF ALLELES
0.950000 0.050000  << GENE FREQUENCIES
1  << NO. OF LIABILITY CLASSES
0.001000 0.001000 0.999000
3  5  # marker2
0.2000 0.2000 0.2000 0.2000 0.2000  
3  5   # marker3
0.2000 0.2000 0.2000 0.2000 0.2000  << GENE FREQUENCIES
3  5   # marker4
0.2000 0.2000 0.2000 0.2000 0.2000  << GENE FREQUENCIES
0 0  << SEX DIFFERENCE, INTERFERENCE (IF 1 OR 2)
0.5 0.090635 0.090635 << RECOMB VALUES
1 0.0 5  << LOC VARIED, FINAL VALUE, INCREMENTS