Welcome to CASSI's webpage!

Please use the menu to the left to navigate through the documentation for CASSI or use the PDF of these webpages, cassi.pdf.

Citation

The CASSI software may be referenced as follows:

@Misc{cassi,
author={Howey, R},
title={{CASSI}},
note={{http://www.staff.ncl.ac.uk/richard.howey/cassi/}}
}
 

The methodology of the joint effects test statistic for SNP interaction can be found in the paper by Ueki and Cordell (2012), and may be referenced as follows:

@article{ueki:etal:12,
author={Ueki, M and Cordell, H J},
title={Improved statistics for genome-wide interaction analysis},
journal={{PLoS Genet}},
volume={8},
number={4},
pages={e1002625},
year={2012}
}

CASSI is copyright, 2012-2017 Richard Howey, GNU General Public License, version 3.