EMIM: Estimation of Maternal, Imprinting and interaction effects using Multinomial modelling

EMIM: Estimation of Maternal, Imprinting and interaction effects using Multinomial modelling

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1 Introduction
- 1.1 Program information and citation
2 Quick Start
3 Slow Start
- 3.1 Compilation of PREMIM source code
- 3.2 Compilation of EMIM source code
4 PREMIM: Pedigree file conversion
5 EMIM: Input files
6 EMIM: Usage and output files
- 6.1 Alternative parameterisations
7 Example using PREMIM and EMIM
- 7.1 Running PREMIM
- 7.2 Running EMIM
8 Parallel processing
9 Parent-of-origin effects with SHAPEIT2
10 Troubleshooting and results interpretation
References

Contact

Please contact Heather Cordell with all queries regarding EMIM.

For queries regarding the pedigree file conversion program, PREMIM, please contact Richard Howey.

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